Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015841990.1_cds_XP_016508204.1_21252
CDS Infomation

[gene=LOC107825805] [db_xref=GeneID:107825805] [protein=arabinosyltransferase XEG113-like] [protein_id=XP_016508204.1] [location=join(53488..53662,55645..55941,56049..56254,57666..57771,59141..59397,59576..59711,60499..60593,60689..60742,61056..61169,62211..62309,62395..62511,63168..63254,63370..63537)] [gbkey=CDS]
Sequence

ATGGCTTGGAACAATCCATTTAAGGAAATGGCGAATTCCAAGCCATTGTTCTTGACGATC
TATGCAACGGTGTTGATCGGGATAGTATTCTCTTCTGTTTATGTGTTTTCAGCCATTTAC
TCTTCTCCTCATTCCTCCACCTTCTCTCTCTCCATTGCTCCTTCTGCTTCTTCAGATGCA
AAAGCAGAACCTTCTAGTCAAGCATCAAATTTTTCTCGTCTACAAGCAGATGGTGATTCA
ACACCTCTGAATCCCCAGCTTCAAAGCAAATTATTGAAGCCAATTTGGATAGTTCCCCCT
GCGGGTTCAAAGATGCCATATTTAGAAAGTTTCAGATTATCAAAAGAACTGGTTGAGGAA
AGAGTTATAGGCAATGTTGTAGTTGTGACCTTTGGTAACTATGCTTTCATGGATTTTATC
TTGACGTGGGTTAAACATTTGACGGACATGGGTGTTGAAAACCTTCTCGTCGGTGCCATG
GACACAAAGCTATTGGAGGCTCTTTATTGGAAAGGAGTACCAGTTTTTGATATGGGTAGC
CATATGAGCACTGTAGATGTTGGATGGGGTTCACCAACATTTCACAAAATGGGGAGAGAG
AAAGTTGTACTCATAGATTCTATCTTACCTTTTGGCTTTGAACTCCTAATGTGTGATACT
GATATGGTGTGGTTAAAGAATCCTCTTCCTTATATTGCACGTTTCCCTGAAGCAGATGTA
TTGACCTCTACTGATCAAGTTGTACCAACAGTTACCGATGACAGATTGGACATGTGGCAA
CAAGTTGGCGCTGCTTATAATATTGGAATCTTCCACTGGCGGGCCACTGAGTCTTCAAAG
AAACTAGCCAGGGAATGGAAAGAAATGATTTTAGCTGACGACAAGATATGGGATCAGAAT
GGTTTCAATGAACTTGTGCGCAGACAGTTGGGACCTTCTGTTGATGATGACAGTGGGCTC
GTCTATGCTTATGATGGAAATCTCAAGCTTGGTCTTCTCCCAGCAAGTATTTTTTGTAGT
GGGCACACCTATTTCGTCCAGGCTATGTTTCAACATCTAAGATTGGAACCTTATGCTGTA
CATACAACATTCCAATATGCTGGAACTGAAGGAAAGCGTCACCGATTACGTGAAGCCATG
GTGTTCTATGATCCACCCGAATACTATGATCCACCAGGAGGGCTTTTGACTTTTAAGCCT
ACAATCCCCAAGAACTTGTTACTGGATGGAGTGCACTCCATAGATACACACTTTGCTCTT
GTTAATTATCAGATGAAACAAATAAGGACTGCGCTTGCTGTTGCTTCAGTGCTGAATCGT
ACCTTGGTAATGCCCCCCCTATGGTGCAGGTTGGATAGGTTGTGGTTTGGACATCCTGGT
ATTCTGGACGGTTCTTTGACAAGGCAACCTTTTGTTTGTCCTTTGGATCATGTTTTTGAG
ATTAATGTGATGTTGAAGGAAATGCCAAATGAGGAATTCGGACCTGGAATCAGTATTAGG
GAGTACTCATTATTCGAGAATCCATCAATGCCACAAGAGGTGAAAAAGTCGTGGCTTGAT
GTACATCTCTGCCATGAAGGGTCACTGGGCTGTCAGGTTAACAGTACTAGTCAAACTGGG
GTTCTCAAACTTCCCAAACACACTAATGAAGAAACGTTGAAGACGGTATTCTCCAAGTTT
AACGATGTGAAAGTAATCCAGTTCTCATCAATGCAAGATGCCTTTGATGGCTTCACGGAC
AAGACAAGGGAAGAACAATTCAGGAACCGTGTCAAGAGGTATGTAGGCATTTGGTGCTGT
GTGGAGAATCACACACCAGGTCATATATACTATGATATGTATTGGGATGAGAAACCTGGT
TGGAAAGCAGCAGCTCCCAACTCTACTGAAGATGATCATCCGCCTTGGTGA

Peptide Sequence

PEP ID

XP_016508204.1
PEP Infomation

PREDICTED: arabinosyltransferase XEG113-like [Nicotiana tabacum]
Sequence

MAWNNPFKEMANSKPLFLTIYATVLIGIVFSSVYVFSAIYSSPHSSTFSLSIAPSASSDA
KAEPSSQASNFSRLQADGDSTPLNPQLQSKLLKPIWIVPPAGSKMPYLESFRLSKELVEE
RVIGNVVVVTFGNYAFMDFILTWVKHLTDMGVENLLVGAMDTKLLEALYWKGVPVFDMGS
HMSTVDVGWGSPTFHKMGREKVVLIDSILPFGFELLMCDTDMVWLKNPLPYIARFPEADV
LTSTDQVVPTVTDDRLDMWQQVGAAYNIGIFHWRATESSKKLAREWKEMILADDKIWDQN
GFNELVRRQLGPSVDDDSGLVYAYDGNLKLGLLPASIFCSGHTYFVQAMFQHLRLEPYAV
HTTFQYAGTEGKRHRLREAMVFYDPPEYYDPPGGLLTFKPTIPKNLLLDGVHSIDTHFAL
VNYQMKQIRTALAVASVLNRTLVMPPLWCRLDRLWFGHPGILDGSLTRQPFVCPLDHVFE
INVMLKEMPNEEFGPGISIREYSLFENPSMPQEVKKSWLDVHLCHEGSLGCQVNSTSQTG
VLKLPKHTNEETLKTVFSKFNDVKVIQFSSMQDAFDGFTDKTREEQFRNRVKRYVGIWCC
VENHTPGHIYYDMYWDEKPGWKAAAPNSTEDDHPPW

Transcript Sequence

Gene sequence data has not been registered.